torch-ecg
Getting started
Installation instructions
Tutorial
API Reference
torch_ecg.databases
Base classes
PhysioNetDataBase
NSRRDataBase
CPSCDataBase
PSGDataBaseMixin
PhysioNet database readers
AFDB
ApneaECG
CINC2017
CINC2018
CINC2020
CINC2021
LTAFDB
LUDB
MITDB
QTDB
CPSC database readers
CPSC2018
CPSC2019
CPSC2020
CPSC2021
NSRR database readers
SHHS
Other database readers
CACHET_CADB
SPH
Miscellaneous
BeatAnn
torch_ecg.databases.datasets
CINC2020Dataset
CINC2021Dataset
CPSC2019Dataset
CPSC2021Dataset
LUDBDataset
MITDBDataset
torch_ecg.models
Convolutional neural backbones
ResNet
RegNet
VGG16
Xception
DenseNet
MobileNetV1
MobileNetV2
MobileNetV3
MultiScopicCNN
Downstream task models
ECG_UNET
ECG_SUBTRACT_UNET
ECG_CRNN
ECG_SEQ_LAB_NET
RR_LSTM
Saliency analysis
GradCam
torch_ecg.models.loss
WeightedBCELoss
BCEWithLogitsWithClassWeightLoss
MaskedBCEWithLogitsLoss
FocalLoss
AsymmetricLoss
torch_ecg.augmenters
AugmenterManager
Augmenter
BaselineWanderAugmenter
CutMix
LabelSmooth
Mixup
RandomFlip
RandomMasking
RandomRenormalize
StretchCompress
StretchCompressOffline
torch_ecg._preprocessors
PreprocManager
PreProcessor
BandPass
BaselineRemove
Normalize
MinMaxNormalize
NaiveNormalize
ZScoreNormalize
Resample
torch_ecg._preprocessors.preprocess_multi_lead_signal
torch_ecg._preprocessors.preprocess_single_lead_signal
torch_ecg.preprocessors
PreprocManager
BandPass
BaselineRemove
Normalize
MinMaxNormalize
NaiveNormalize
ZScoreNormalize
Resample
torch_ecg.components
Input classes
InputConfig
WaveformInput
FFTInput
SpectrogramInput
Output classes
ClassificationOutput
MultiLabelClassificationOutput
SequenceTaggingOutput
SequenceLabellingOutput
WaveDelineationOutput
RPeaksDetectionOutput
Loggers
LoggerManager
Metrics
ClassificationMetrics
RPeaksDetectionMetrics
WaveDelineationMetrics
Trainer
BaseTrainer
torch_ecg.utils
Neural network auxiliary functions and classes
torch_ecg.utils.extend_predictions
torch_ecg.utils.compute_output_shape
torch_ecg.utils.compute_conv_output_shape
torch_ecg.utils.compute_deconv_output_shape
torch_ecg.utils.compute_maxpool_output_shape
torch_ecg.utils.compute_avgpool_output_shape
torch_ecg.utils.compute_sequential_output_shape
torch_ecg.utils.compute_module_size
torch_ecg.utils.default_collate_fn
torch_ecg.utils.compute_receptive_field
torch_ecg.utils.adjust_cnn_filter_lengths
SizeMixin
CkptMixin
Signal processing functions
torch_ecg.utils.smooth
torch_ecg.utils.resample_irregular_timeseries
torch_ecg.utils.detect_peaks
torch_ecg.utils.remove_spikes_naive
torch_ecg.utils.butter_bandpass_filter
torch_ecg.utils.get_ampl
torch_ecg.utils.normalize
torch_ecg.utils.normalize_t
torch_ecg.utils.resample_t
Data operations
torch_ecg.utils.get_mask
torch_ecg.utils.class_weight_to_sample_weight
torch_ecg.utils.ensure_lead_fmt
torch_ecg.utils.ensure_siglen
torch_ecg.utils.masks_to_waveforms
torch_ecg.utils.mask_to_intervals
torch_ecg.utils.uniform
torch_ecg.utils.stratified_train_test_split
torch_ecg.utils.cls_to_bin
torch_ecg.utils.generate_weight_mask
Interval operations
torch_ecg.utils.overlaps
torch_ecg.utils.validate_interval
torch_ecg.utils.in_interval
torch_ecg.utils.in_generalized_interval
torch_ecg.utils.intervals_union
torch_ecg.utils.generalized_intervals_union
torch_ecg.utils.intervals_intersection
torch_ecg.utils.generalized_intervals_intersection
torch_ecg.utils.generalized_interval_complement
torch_ecg.utils.get_optimal_covering
torch_ecg.utils.interval_len
torch_ecg.utils.generalized_interval_len
torch_ecg.utils.find_extrema
torch_ecg.utils.is_intersect
torch_ecg.utils.max_disjoint_covering
Metrics computations
torch_ecg.utils.top_n_accuracy
torch_ecg.utils.confusion_matrix
torch_ecg.utils.ovr_confusion_matrix
torch_ecg.utils.metrics_from_confusion_matrix
torch_ecg.utils.compute_wave_delineation_metrics
torch_ecg.utils.QRS_score
Decorators and Mixins
torch_ecg.utils.add_docstring
torch_ecg.utils.remove_parameters_returns_from_docstring
torch_ecg.utils.default_class_repr
ReprMixin
CitationMixin
torch_ecg.utils.get_kwargs
torch_ecg.utils.get_required_args
torch_ecg.utils.add_kwargs
Path operations
torch_ecg.utils.get_record_list_recursive3
String operations
torch_ecg.utils.dict_to_str
torch_ecg.utils.str2bool
torch_ecg.utils.nildent
torch_ecg.utils.get_date_str
Miscellaneous
torch_ecg.utils.init_logger
torch_ecg.utils.list_sum
torch_ecg.utils.dicts_equal
MovingAverage
Timer
torch_ecg.utils.timeout
Examples
Examples
torch-ecg
Docs
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Index
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Index
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Z
A
add_() (torch_ecg._preprocessors.PreprocManager method)
(torch_ecg.preprocessors.PreprocManager method)
add_docstring() (in module torch_ecg.utils)
add_kwargs() (in module torch_ecg.utils)
add_timer() (torch_ecg.utils.Timer method)
adjust_cnn_filter_lengths() (in module torch_ecg.utils)
AFDB (class in torch_ecg.databases)
all_extensions (torch_ecg.databases.QTDB attribute)
all_records (torch_ecg.databases.CINC2021 property)
all_subjects (torch_ecg.databases.CACHET_CADB property)
ApneaECG (class in torch_ecg.databases)
apply() (torch_ecg._preprocessors.BandPass method)
(torch_ecg._preprocessors.BaselineRemove method)
(torch_ecg._preprocessors.Normalize method)
(torch_ecg._preprocessors.PreProcessor method)
(torch_ecg._preprocessors.Resample method)
assign_weights_lead_wise() (torch_ecg.models.MultiScopicCNN method)
AsymmetricLoss (class in torch_ecg.models.loss)
Augmenter (class in torch_ecg.augmenters)
AugmenterManager (class in torch_ecg.augmenters)
augmenters (torch_ecg.augmenters.AugmenterManager property)
B
BandPass (class in torch_ecg._preprocessors)
(class in torch_ecg.preprocessors)
BaselineRemove (class in torch_ecg._preprocessors)
(class in torch_ecg.preprocessors)
BaselineWanderAugmenter (class in torch_ecg.augmenters)
BaseTrainer (class in torch_ecg.components)
batch_dim (torch_ecg.components.BaseTrainer property)
BCEWithLogitsWithClassWeightLoss (class in torch_ecg.models.loss)
beat_types_records (torch_ecg.databases.MITDB property)
BeatAnn (class in torch_ecg.databases)
building_block (torch_ecg.models.ResNet attribute)
butter_bandpass_filter() (in module torch_ecg.utils)
C
CACHET_CADB (class in torch_ecg.databases)
CINC2017 (class in torch_ecg.databases)
CINC2018 (class in torch_ecg.databases)
CINC2020 (class in torch_ecg.databases)
CINC2020Dataset (class in torch_ecg.databases.datasets)
CINC2021 (class in torch_ecg.databases)
CINC2021Dataset (class in torch_ecg.databases.datasets)
CitationMixin (class in torch_ecg.utils)
CkptMixin (class in torch_ecg.utils)
class_weight_to_sample_weight() (in module torch_ecg.utils)
ClassificationMetrics (class in torch_ecg.components)
ClassificationOutput (class in torch_ecg.components)
close() (torch_ecg.components.LoggerManager method)
cls_to_bin() (in module torch_ecg.utils)
compute() (torch_ecg.components.ClassificationMetrics method)
(torch_ecg.components.RPeaksDetectionMetrics method)
(torch_ecg.components.WaveDelineationMetrics method)
compute_avgpool_output_shape() (in module torch_ecg.utils)
compute_conv_output_shape() (in module torch_ecg.utils)
compute_deconv_output_shape() (in module torch_ecg.utils)
compute_maxpool_output_shape() (in module torch_ecg.utils)
compute_metrics() (torch_ecg.components.ClassificationOutput method)
(torch_ecg.components.MultiLabelClassificationOutput method)
(torch_ecg.components.RPeaksDetectionOutput method)
(torch_ecg.components.SequenceLabellingOutput method)
(torch_ecg.components.WaveDelineationOutput method)
compute_module_size() (in module torch_ecg.utils)
compute_output_shape() (in module torch_ecg.utils)
(torch_ecg.models.DenseNet method)
(torch_ecg.models.ECG_CRNN method)
(torch_ecg.models.ECG_SEQ_LAB_NET method)
(torch_ecg.models.ECG_SUBTRACT_UNET method)
(torch_ecg.models.ECG_UNET method)
(torch_ecg.models.MobileNetV1 method)
(torch_ecg.models.MobileNetV2 method)
(torch_ecg.models.MobileNetV3 method)
(torch_ecg.models.MultiScopicCNN method)
(torch_ecg.models.RegNet method)
(torch_ecg.models.ResNet method)
(torch_ecg.models.RR_LSTM method)
(torch_ecg.models.VGG16 method)
(torch_ecg.models.Xception method)
compute_receptive_field() (in module torch_ecg.utils)
compute_sequential_output_shape() (in module torch_ecg.utils)
compute_wave_delineation_metrics() (in module torch_ecg.utils)
confusion_matrix() (in module torch_ecg.utils)
CPSC2018 (class in torch_ecg.databases)
CPSC2019 (class in torch_ecg.databases)
CPSC2019Dataset (class in torch_ecg.databases.datasets)
CPSC2020 (class in torch_ecg.databases)
CPSC2021 (class in torch_ecg.databases)
CPSC2021Dataset (class in torch_ecg.databases.datasets)
CPSCDataBase (class in torch_ecg.databases)
CutMix (class in torch_ecg.augmenters)
D
database_info (torch_ecg.databases.AFDB property)
(torch_ecg.databases.ApneaECG property)
(torch_ecg.databases.CACHET_CADB property)
(torch_ecg.databases.CINC2017 property)
(torch_ecg.databases.CINC2018 property)
(torch_ecg.databases.CINC2020 property)
(torch_ecg.databases.CINC2021 property)
(torch_ecg.databases.CPSC2018 property)
(torch_ecg.databases.CPSC2019 property)
(torch_ecg.databases.CPSC2020 property)
(torch_ecg.databases.CPSC2021 property)
(torch_ecg.databases.LTAFDB property)
(torch_ecg.databases.LUDB property)
(torch_ecg.databases.MITDB property)
(torch_ecg.databases.QTDB property)
(torch_ecg.databases.SHHS property)
(torch_ecg.databases.SPH property)
db_stats (torch_ecg.databases.MITDB property)
default_class_repr() (in module torch_ecg.utils)
default_collate_fn() (in module torch_ecg.utils)
DenseNet (class in torch_ecg.models)
detect_peaks() (in module torch_ecg.utils)
df_metadata (torch_ecg.databases.CACHET_CADB property)
df_stats (torch_ecg.databases.CINC2021 property)
(torch_ecg.databases.MITDB property)
df_stats_expanded (torch_ecg.databases.MITDB property)
df_stats_expanded_boolean (torch_ecg.databases.MITDB property)
diagnoses_records_list (torch_ecg.databases.CINC2021 property)
dict_to_str() (in module torch_ecg.utils)
dicts_equal() (in module torch_ecg.utils)
download() (torch_ecg.databases.CACHET_CADB method)
(torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
(torch_ecg.databases.CPSC2018 method)
(torch_ecg.databases.CPSCDataBase method)
(torch_ecg.databases.PhysioNetDataBase method)
(torch_ecg.databases.SPH method)
E
ECG_CRNN (class in torch_ecg.models)
ecg_records (torch_ecg.databases.ApneaECG property)
ECG_SEQ_LAB_NET (class in torch_ecg.models)
ECG_SUBTRACT_UNET (class in torch_ecg.models)
ECG_UNET (class in torch_ecg.models)
empty() (torch_ecg.databases.datasets.CINC2021Dataset method)
ensure_lead_fmt() (in module torch_ecg.utils)
ensure_siglen() (in module torch_ecg.utils)
epoch_end() (torch_ecg.components.LoggerManager method)
epoch_start() (torch_ecg.components.LoggerManager method)
evaluate() (torch_ecg.components.BaseTrainer method)
extend_predictions() (in module torch_ecg.utils)
extra_log_suffix() (torch_ecg.components.BaseTrainer method)
extra_repr() (torch_ecg.augmenters.AugmenterManager method)
extra_repr_keys() (torch_ecg._preprocessors.BandPass method)
(torch_ecg._preprocessors.BaselineRemove method)
(torch_ecg._preprocessors.MinMaxNormalize method)
(torch_ecg._preprocessors.NaiveNormalize method)
(torch_ecg._preprocessors.Normalize method)
(torch_ecg._preprocessors.PreprocManager method)
(torch_ecg._preprocessors.Resample method)
(torch_ecg._preprocessors.ZScoreNormalize method)
(torch_ecg.augmenters.BaselineWanderAugmenter method)
(torch_ecg.augmenters.CutMix method)
(torch_ecg.augmenters.LabelSmooth method)
(torch_ecg.augmenters.Mixup method)
(torch_ecg.augmenters.RandomFlip method)
(torch_ecg.augmenters.RandomMasking method)
(torch_ecg.augmenters.RandomRenormalize method)
(torch_ecg.augmenters.StretchCompress method)
(torch_ecg.augmenters.StretchCompressOffline method)
(torch_ecg.components.BaseTrainer method)
(torch_ecg.components.ClassificationMetrics method)
(torch_ecg.components.FFTInput method)
(torch_ecg.components.LoggerManager method)
(torch_ecg.components.RPeaksDetectionMetrics method)
(torch_ecg.components.WaveDelineationMetrics method)
(torch_ecg.databases.datasets.CINC2020Dataset method)
(torch_ecg.databases.datasets.CINC2021Dataset method)
(torch_ecg.databases.datasets.CPSC2019Dataset method)
(torch_ecg.databases.datasets.CPSC2021Dataset method)
(torch_ecg.databases.datasets.LUDBDataset method)
(torch_ecg.databases.datasets.MITDBDataset method)
(torch_ecg.preprocessors.PreprocManager method)
(torch_ecg.utils.ReprMixin method)
(torch_ecg.utils.Timer method)
extra_required_train_config_fields (torch_ecg.components.BaseTrainer property)
extract_features() (torch_ecg.models.ECG_CRNN method)
F
FFTInput (class in torch_ecg.components)
find_extrema() (in module torch_ecg.utils)
flush() (torch_ecg.components.LoggerManager method)
FocalLoss (class in torch_ecg.models.loss)
form_paths() (torch_ecg.databases.SHHS method)
forward() (torch_ecg.augmenters.Augmenter method)
(torch_ecg.augmenters.AugmenterManager method)
(torch_ecg.augmenters.BaselineWanderAugmenter method)
(torch_ecg.augmenters.CutMix method)
(torch_ecg.augmenters.LabelSmooth method)
(torch_ecg.augmenters.Mixup method)
(torch_ecg.augmenters.RandomFlip method)
(torch_ecg.augmenters.RandomMasking method)
(torch_ecg.augmenters.RandomRenormalize method)
(torch_ecg.augmenters.StretchCompress method)
(torch_ecg.models.ECG_CRNN method)
(torch_ecg.models.ECG_SEQ_LAB_NET method)
(torch_ecg.models.ECG_SUBTRACT_UNET method)
(torch_ecg.models.ECG_UNET method)
(torch_ecg.models.loss.AsymmetricLoss method)
(torch_ecg.models.loss.BCEWithLogitsWithClassWeightLoss method)
(torch_ecg.models.loss.FocalLoss method)
(torch_ecg.models.loss.MaskedBCEWithLogitsLoss method)
(torch_ecg.models.loss.WeightedBCELoss method)
(torch_ecg.models.MultiScopicCNN method)
(torch_ecg.models.RR_LSTM method)
(torch_ecg.models.Xception method)
(torch_ecg.preprocessors.BandPass method)
(torch_ecg.preprocessors.BaselineRemove method)
(torch_ecg.preprocessors.Normalize method)
(torch_ecg.preprocessors.PreprocManager method)
(torch_ecg.preprocessors.Resample method)
from_checkpoint() (torch_ecg.utils.CkptMixin class method)
from_config() (torch_ecg._preprocessors.PreprocManager class method)
(torch_ecg.augmenters.AugmenterManager class method)
(torch_ecg.components.LoggerManager class method)
(torch_ecg.preprocessors.PreprocManager class method)
from_extern() (torch_ecg.databases.datasets.CINC2021Dataset class method)
from_masks() (torch_ecg.databases.LUDB method)
from_v1() (torch_ecg.models.ECG_CRNN class method)
(torch_ecg.models.ECG_SEQ_LAB_NET class method)
(torch_ecg.models.RR_LSTM class method)
from_waveform() (torch_ecg.components.FFTInput method)
(torch_ecg.components.SpectrogramInput method)
(torch_ecg.components.WaveformInput method)
G
gen_endpoint_score_mask() (torch_ecg.databases.CPSC2021 method)
generalized_interval_complement() (in module torch_ecg.utils)
generalized_interval_len() (in module torch_ecg.utils)
generalized_intervals_intersection() (in module torch_ecg.utils)
generalized_intervals_union() (in module torch_ecg.utils)
generate() (torch_ecg.augmenters.StretchCompressOffline method)
generate_weight_mask() (in module torch_ecg.utils)
get_absolute_path() (torch_ecg.databases.CACHET_CADB method)
(torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
(torch_ecg.databases.CPSC2019 method)
(torch_ecg.databases.CPSC2020 method)
(torch_ecg.databases.CPSC2021 method)
(torch_ecg.databases.LUDB method)
(torch_ecg.databases.SHHS method)
get_age() (torch_ecg.databases.SPH method)
get_ampl() (in module torch_ecg.utils)
get_ann_filepath() (torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
get_available_signals() (torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.SHHS method)
get_chn_num() (torch_ecg.databases.SHHS method)
get_citation() (torch_ecg.utils.CitationMixin method)
get_data_filepath() (torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
get_date_str() (in module torch_ecg.utils)
get_file_download_url() (torch_ecg.databases.PhysioNetDataBase method)
get_fs() (torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
(torch_ecg.databases.SHHS method)
get_header_filepath() (torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
get_indices() (torch_ecg.augmenters.Augmenter method)
get_kwargs() (in module torch_ecg.utils)
get_labels() (torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
(torch_ecg.databases.CPSC2018 method)
get_lead_names() (torch_ecg.databases.QTDB method)
get_mask() (in module torch_ecg.utils)
get_nsrrid() (torch_ecg.databases.SHHS method)
get_optimal_covering() (in module torch_ecg.utils)
get_record_list_recursive3() (in module torch_ecg.utils)
get_record_metadata() (torch_ecg.databases.CACHET_CADB method)
get_required_args() (in module torch_ecg.utils)
get_sex() (torch_ecg.databases.SPH method)
get_siglen() (torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.SPH method)
get_subject_id() (torch_ecg.databases.ApneaECG method)
(torch_ecg.databases.CACHET_CADB method)
(torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
(torch_ecg.databases.CPSC2018 method)
(torch_ecg.databases.CPSC2019 method)
(torch_ecg.databases.CPSC2020 method)
(torch_ecg.databases.CPSC2021 method)
(torch_ecg.databases.CPSCDataBase method)
(torch_ecg.databases.LTAFDB method)
(torch_ecg.databases.LUDB method)
(torch_ecg.databases.NSRRDataBase method)
(torch_ecg.databases.PhysioNetDataBase method)
(torch_ecg.databases.QTDB method)
(torch_ecg.databases.SHHS method)
(torch_ecg.databases.SPH method)
get_subject_info() (torch_ecg.databases.CACHET_CADB method)
(torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
(torch_ecg.databases.CPSC2018 method)
(torch_ecg.databases.SPH method)
get_table() (torch_ecg.databases.SHHS method)
get_tranche() (torch_ecg.databases.SHHS method)
get_tranche_class_distribution() (torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
get_visitnumber() (torch_ecg.databases.SHHS method)
GradCam (class in torch_ecg.models)
H
helper() (torch_ecg.databases.CPSCDataBase method)
(torch_ecg.databases.NSRRDataBase method)
(torch_ecg.databases.PhysioNetDataBase method)
I
in_generalized_interval() (in module torch_ecg.utils)
in_interval() (in module torch_ecg.utils)
index (torch_ecg.databases.BeatAnn attribute)
inference() (torch_ecg.models.ECG_CRNN method)
(torch_ecg.models.ECG_SUBTRACT_UNET method)
(torch_ecg.models.ECG_UNET method)
(torch_ecg.models.RR_LSTM method)
init_logger() (in module torch_ecg.utils)
InputConfig (class in torch_ecg.components)
interval_len() (in module torch_ecg.utils)
intervals_intersection() (in module torch_ecg.utils)
intervals_union() (in module torch_ecg.utils)
is_intersect() (in module torch_ecg.utils)
L
labels (torch_ecg.databases.datasets.CINC2020Dataset property)
(torch_ecg.databases.datasets.CINC2021Dataset property)
(torch_ecg.databases.datasets.CPSC2019Dataset property)
(torch_ecg.databases.datasets.LUDBDataset property)
LabelSmooth (class in torch_ecg.augmenters)
list_sum() (in module torch_ecg.utils)
list_table_names() (torch_ecg.databases.SHHS method)
load_af_episodes() (torch_ecg.databases.CPSC2021 method)
load_ann() (torch_ecg.databases.AFDB method)
(torch_ecg.databases.ApneaECG method)
(torch_ecg.databases.CACHET_CADB method)
(torch_ecg.databases.CINC2017 method)
(torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
(torch_ecg.databases.CPSC2018 method)
(torch_ecg.databases.CPSC2019 method)
(torch_ecg.databases.CPSC2020 method)
(torch_ecg.databases.CPSC2021 method)
(torch_ecg.databases.LTAFDB method)
(torch_ecg.databases.LUDB method)
(torch_ecg.databases.MITDB method)
(torch_ecg.databases.QTDB method)
(torch_ecg.databases.SHHS method)
(torch_ecg.databases.SPH method)
load_apnea_ann() (torch_ecg.databases.SHHS method)
load_apnea_event() (torch_ecg.databases.ApneaECG method)
load_arousals_ann() (torch_ecg.databases.CINC2018 method)
load_beat_ann() (torch_ecg.databases.AFDB method)
(torch_ecg.databases.LTAFDB method)
(torch_ecg.databases.MITDB method)
(torch_ecg.databases.QTDB method)
load_context_ann() (torch_ecg.databases.CACHET_CADB method)
load_context_data() (torch_ecg.databases.CACHET_CADB method)
load_data() (torch_ecg.databases.ApneaECG method)
(torch_ecg.databases.CACHET_CADB method)
(torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
(torch_ecg.databases.CPSC2018 method)
(torch_ecg.databases.CPSC2019 method)
(torch_ecg.databases.CPSC2020 method)
(torch_ecg.databases.LTAFDB method)
(torch_ecg.databases.PhysioNetDataBase method)
(torch_ecg.databases.SHHS method)
(torch_ecg.databases.SPH method)
load_diagnoses() (torch_ecg.databases.LUDB method)
load_ecg_data() (torch_ecg.databases.ApneaECG method)
(torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.SHHS method)
load_eeg_band_ann() (torch_ecg.databases.SHHS method)
load_eeg_spectral_ann() (torch_ecg.databases.SHHS method)
load_event_ann() (torch_ecg.databases.SHHS method)
load_event_profusion_ann() (torch_ecg.databases.SHHS method)
load_header() (torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
load_hrv_detailed_ann() (torch_ecg.databases.SHHS method)
load_hrv_summary_ann() (torch_ecg.databases.SHHS method)
load_label() (torch_ecg.databases.CPSC2021 method)
load_masks() (torch_ecg.databases.LUDB method)
load_nn_ann() (torch_ecg.databases.SHHS method)
load_preprocessed_data() (torch_ecg.databases.datasets.CPSC2021Dataset method)
load_psg_data() (torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.SHHS method)
load_raw_data() (torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
load_resampled_data() (torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
load_rhythm_ann() (torch_ecg.databases.LTAFDB method)
(torch_ecg.databases.MITDB method)
(torch_ecg.databases.QTDB method)
load_rpeak_ann() (torch_ecg.databases.SHHS method)
load_rpeak_indices() (torch_ecg.databases.AFDB method)
(torch_ecg.databases.CPSC2019 method)
(torch_ecg.databases.CPSC2021 method)
(torch_ecg.databases.LTAFDB method)
(torch_ecg.databases.MITDB method)
(torch_ecg.databases.QTDB method)
load_rpeaks() (torch_ecg.databases.CPSC2019 method)
(torch_ecg.databases.CPSC2021 method)
load_rr_ann() (torch_ecg.databases.SHHS method)
load_rsp_data() (torch_ecg.databases.ApneaECG method)
load_sleep_ann() (torch_ecg.databases.SHHS method)
load_sleep_event_ann() (torch_ecg.databases.SHHS method)
load_sleep_stage_ann() (torch_ecg.databases.SHHS method)
load_sleep_stages_ann() (torch_ecg.databases.CINC2018 method)
load_subject_info() (torch_ecg.databases.LUDB method)
load_wave_ann() (torch_ecg.databases.QTDB method)
load_wave_delineation_ann() (torch_ecg.databases.SHHS method)
load_wave_masks() (torch_ecg.databases.QTDB method)
locate_abnormal_beats() (torch_ecg.databases.SHHS method)
locate_artifacts() (torch_ecg.databases.SHHS method)
locate_premature_beats() (torch_ecg.databases.CPSC2020 method)
log_dir (torch_ecg.components.LoggerManager property)
log_message() (torch_ecg.components.LoggerManager method)
log_metrics() (torch_ecg.components.LoggerManager method)
log_suffix (torch_ecg.components.LoggerManager property)
LoggerManager (class in torch_ecg.components)
loggers (torch_ecg.components.LoggerManager property)
LTAFDB (class in torch_ecg.databases)
LUDB (class in torch_ecg.databases)
LUDBDataset (class in torch_ecg.databases.datasets)
M
mask_to_intervals() (in module torch_ecg.utils)
MaskedBCEWithLogitsLoss (class in torch_ecg.models.loss)
masks_to_waveforms() (in module torch_ecg.utils)
match_channel() (torch_ecg.databases.SHHS method)
max_disjoint_covering() (in module torch_ecg.utils)
metrics_from_confusion_matrix() (in module torch_ecg.utils)
MinMaxNormalize (class in torch_ecg._preprocessors)
(class in torch_ecg.preprocessors)
MITDB (class in torch_ecg.databases)
MITDBDataset (class in torch_ecg.databases.datasets)
Mixup (class in torch_ecg.augmenters)
MobileNetV1 (class in torch_ecg.models)
MobileNetV2 (class in torch_ecg.models)
MobileNetV3 (class in torch_ecg.models)
module
torch_ecg._preprocessors
torch_ecg.augmenters
torch_ecg.components
torch_ecg.databases
torch_ecg.databases.datasets
torch_ecg.model_configs
torch_ecg.models
torch_ecg.models.loss
torch_ecg.preprocessors
torch_ecg.utils
MovingAverage (class in torch_ecg.utils)
MultiLabelClassificationOutput (class in torch_ecg.components)
MultiScopicCNN (class in torch_ecg.models)
N
NaiveNormalize (class in torch_ecg._preprocessors)
(class in torch_ecg.preprocessors)
name (torch_ecg.databases.BeatAnn attribute)
nildent() (in module torch_ecg.utils)
Normalize (class in torch_ecg._preprocessors)
(class in torch_ecg.preprocessors)
normalize() (in module torch_ecg.utils)
normalize_t() (in module torch_ecg.utils)
NSRRDataBase (class in torch_ecg.databases)
O
overlaps() (in module torch_ecg.utils)
ovr_confusion_matrix() (in module torch_ecg.utils)
P
persistence() (torch_ecg.databases.datasets.CINC2020Dataset method)
(torch_ecg.databases.datasets.CINC2021Dataset method)
(torch_ecg.databases.datasets.CPSC2021Dataset method)
(torch_ecg.databases.datasets.MITDBDataset method)
PhysioNetDataBase (class in torch_ecg.databases)
plot() (torch_ecg.databases.AFDB method)
(torch_ecg.databases.CACHET_CADB method)
(torch_ecg.databases.CINC2017 method)
(torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.CINC2020 method)
(torch_ecg.databases.CINC2021 method)
(torch_ecg.databases.CPSC2018 method)
(torch_ecg.databases.CPSC2019 method)
(torch_ecg.databases.CPSC2020 method)
(torch_ecg.databases.CPSC2021 method)
(torch_ecg.databases.LTAFDB method)
(torch_ecg.databases.LUDB method)
(torch_ecg.databases.MITDB method)
(torch_ecg.databases.QTDB method)
(torch_ecg.databases.SPH method)
plot_ann() (torch_ecg.databases.ApneaECG method)
(torch_ecg.databases.CINC2018 method)
(torch_ecg.databases.SHHS method)
plot_hypnogram() (torch_ecg.databases.PSGDataBaseMixin method)
plot_seg() (torch_ecg.databases.datasets.CPSC2021Dataset method)
(torch_ecg.databases.datasets.MITDBDataset method)
preprocess_multi_lead_signal() (in module torch_ecg._preprocessors)
preprocess_single_lead_signal() (in module torch_ecg._preprocessors)
PreProcessor (class in torch_ecg._preprocessors)
PreprocManager (class in torch_ecg._preprocessors)
(class in torch_ecg.preprocessors)
Properties (torch_ecg.databases.BeatAnn attribute)
PSGDataBaseMixin (class in torch_ecg.databases)
Q
QRS_score() (in module torch_ecg.utils)
QTDB (class in torch_ecg.databases)
R
RandomFlip (class in torch_ecg.augmenters)
RandomMasking (class in torch_ecg.augmenters)
RandomRenormalize (class in torch_ecg.augmenters)
rearrange() (torch_ecg._preprocessors.PreprocManager method)
(torch_ecg.augmenters.AugmenterManager method)
(torch_ecg.preprocessors.PreprocManager method)
RegNet (class in torch_ecg.models)
reload_from_extern() (torch_ecg.databases.datasets.CINC2021Dataset method)
remove_parameters_returns_from_docstring() (in module torch_ecg.utils)
remove_spikes_naive() (in module torch_ecg.utils)
ReprMixin (class in torch_ecg.utils)
required_fields() (torch_ecg.components.ClassificationOutput method)
(torch_ecg.components.MultiLabelClassificationOutput method)
(torch_ecg.components.RPeaksDetectionOutput method)
(torch_ecg.components.SequenceLabellingOutput method)
(torch_ecg.components.WaveDelineationOutput method)
required_train_config_fields (torch_ecg.components.BaseTrainer property)
Resample (class in torch_ecg._preprocessors)
(class in torch_ecg.preprocessors)
resample_irregular_timeseries() (in module torch_ecg.utils)
resample_t() (in module torch_ecg.utils)
reset_task() (torch_ecg.databases.datasets.CPSC2021Dataset method)
(torch_ecg.databases.datasets.MITDBDataset method)
ResNet (class in torch_ecg.models)
resume_from_checkpoint() (torch_ecg.components.BaseTrainer method)
rhythm_types_records (torch_ecg.databases.MITDB property)
RPeaksDetectionMetrics (class in torch_ecg.components)
RPeaksDetectionOutput (class in torch_ecg.components)
RR_LSTM (class in torch_ecg.models)
rsp_records (torch_ecg.databases.ApneaECG property)
run_one_step() (torch_ecg.components.BaseTrainer method)
S
safe_edf_file_operation() (torch_ecg.databases.NSRRDataBase method)
save() (torch_ecg.utils.CkptMixin method)
save_checkpoint() (torch_ecg.components.BaseTrainer method)
save_prefix (torch_ecg.components.BaseTrainer property)
SequenceLabellingOutput (class in torch_ecg.components)
SequenceTaggingOutput (in module torch_ecg.components)
set_macro() (torch_ecg.components.ClassificationMetrics method)
(torch_ecg.components.WaveDelineationMetrics method)
set_subset() (torch_ecg.databases.CINC2018 method)
SHHS (class in torch_ecg.databases)
show_rec_stats() (torch_ecg.databases.NSRRDataBase method)
(torch_ecg.databases.SHHS method)
signals (torch_ecg.databases.datasets.CINC2020Dataset property)
(torch_ecg.databases.datasets.CINC2021Dataset property)
(torch_ecg.databases.datasets.CPSC2019Dataset property)
(torch_ecg.databases.datasets.LUDBDataset property)
SizeMixin (class in torch_ecg.utils)
sleep_stage_intervals_to_mask() (torch_ecg.databases.PSGDataBaseMixin method)
smooth() (in module torch_ecg.utils)
SpectrogramInput (class in torch_ecg.components)
SPH (class in torch_ecg.databases)
split_rec_name() (torch_ecg.databases.SHHS method)
stop_timer() (torch_ecg.utils.Timer method)
str2bool() (in module torch_ecg.utils)
str_to_real_number() (torch_ecg.databases.SHHS method)
stratified_train_test_split() (in module torch_ecg.utils)
StretchCompress (class in torch_ecg.augmenters)
StretchCompressOffline (class in torch_ecg.augmenters)
subject_records (torch_ecg.databases.CACHET_CADB property)
symbol (torch_ecg.databases.BeatAnn attribute)
T
timeout() (in module torch_ecg.utils)
Timer (class in torch_ecg.utils)
to() (torch_ecg.databases.datasets.CINC2021Dataset method)
top_n_accuracy() (in module torch_ecg.utils)
torch_ecg._preprocessors
module
torch_ecg.augmenters
module
torch_ecg.components
module
torch_ecg.databases
module
torch_ecg.databases.datasets
module
torch_ecg.model_configs
module
torch_ecg.models
module
torch_ecg.models.loss
module
torch_ecg.preprocessors
module
torch_ecg.utils
module
train() (torch_ecg.components.BaseTrainer method)
train_one_epoch() (torch_ecg.components.BaseTrainer method)
train_test_split_rec() (torch_ecg.databases.CPSC2020 method)
U
uniform() (in module torch_ecg.utils)
update_sleep_stage_names() (torch_ecg.databases.SHHS method)
url (torch_ecg.databases.CACHET_CADB property)
(torch_ecg.databases.CINC2020 property)
(torch_ecg.databases.CINC2021 property)
(torch_ecg.databases.CPSC2018 property)
(torch_ecg.databases.CPSC2019 property)
(torch_ecg.databases.CPSC2020 property)
(torch_ecg.databases.PhysioNetDataBase property)
(torch_ecg.databases.SHHS property)
(torch_ecg.databases.SPH property)
url_ (torch_ecg.databases.CPSC2021 property)
(torch_ecg.databases.PhysioNetDataBase property)
V
validate_interval() (in module torch_ecg.utils)
version (torch_ecg.databases.PhysioNetDataBase property)
VGG16 (class in torch_ecg.models)
W
WaveDelineationMetrics (class in torch_ecg.components)
WaveDelineationOutput (class in torch_ecg.components)
WaveformInput (class in torch_ecg.components)
webpage (torch_ecg.databases.PhysioNetDataBase property)
WeightedBCELoss (class in torch_ecg.models.loss)
X
Xception (class in torch_ecg.models)
Z
ZScoreNormalize (class in torch_ecg._preprocessors)
(class in torch_ecg.preprocessors)