torch-ecg
Getting started
Installation instructions
Tutorial
API Reference
torch_ecg.databases
Base classes
PhysioNetDataBase
NSRRDataBase
CPSCDataBase
PSGDataBaseMixin
PhysioNet database readers
AFDB
ApneaECG
CINC2017
CINC2018
CINC2020
CINC2021
LTAFDB
LUDB
MITDB
QTDB
CPSC database readers
CPSC2018
CPSC2019
CPSC2020
CPSC2021
NSRR database readers
SHHS
Other database readers
CACHET_CADB
SPH
Miscellaneous
BeatAnn
torch_ecg.databases.datasets
CINC2020Dataset
CINC2021Dataset
CPSC2019Dataset
CPSC2021Dataset
LUDBDataset
MITDBDataset
torch_ecg.models
Convolutional neural backbones
ResNet
RegNet
VGG16
Xception
DenseNet
MobileNetV1
MobileNetV2
MobileNetV3
MultiScopicCNN
Downstream task models
ECG_UNET
ECG_SUBTRACT_UNET
ECG_CRNN
ECG_SEQ_LAB_NET
RR_LSTM
Saliency analysis
GradCam
torch_ecg.models.loss
WeightedBCELoss
BCEWithLogitsWithClassWeightLoss
MaskedBCEWithLogitsLoss
FocalLoss
AsymmetricLoss
torch_ecg.augmenters
AugmenterManager
Augmenter
BaselineWanderAugmenter
CutMix
LabelSmooth
Mixup
RandomFlip
RandomMasking
RandomRenormalize
StretchCompress
StretchCompressOffline
torch_ecg._preprocessors
PreprocManager
PreProcessor
BandPass
BaselineRemove
Normalize
MinMaxNormalize
NaiveNormalize
ZScoreNormalize
Resample
torch_ecg._preprocessors.preprocess_multi_lead_signal
torch_ecg._preprocessors.preprocess_single_lead_signal
torch_ecg.preprocessors
PreprocManager
BandPass
BaselineRemove
Normalize
MinMaxNormalize
NaiveNormalize
ZScoreNormalize
Resample
torch_ecg.components
Input classes
InputConfig
WaveformInput
FFTInput
SpectrogramInput
Output classes
ClassificationOutput
MultiLabelClassificationOutput
SequenceTaggingOutput
SequenceLabellingOutput
WaveDelineationOutput
RPeaksDetectionOutput
Loggers
LoggerManager
Metrics
ClassificationMetrics
RPeaksDetectionMetrics
WaveDelineationMetrics
Trainer
BaseTrainer
torch_ecg.utils
Neural network auxiliary functions and classes
torch_ecg.utils.extend_predictions
torch_ecg.utils.compute_output_shape
torch_ecg.utils.compute_conv_output_shape
torch_ecg.utils.compute_deconv_output_shape
torch_ecg.utils.compute_maxpool_output_shape
torch_ecg.utils.compute_avgpool_output_shape
torch_ecg.utils.compute_sequential_output_shape
torch_ecg.utils.compute_module_size
torch_ecg.utils.default_collate_fn
torch_ecg.utils.compute_receptive_field
torch_ecg.utils.adjust_cnn_filter_lengths
SizeMixin
CkptMixin
Signal processing functions
torch_ecg.utils.smooth
torch_ecg.utils.resample_irregular_timeseries
torch_ecg.utils.detect_peaks
torch_ecg.utils.remove_spikes_naive
torch_ecg.utils.butter_bandpass_filter
torch_ecg.utils.get_ampl
torch_ecg.utils.normalize
torch_ecg.utils.normalize_t
torch_ecg.utils.resample_t
Data operations
torch_ecg.utils.get_mask
torch_ecg.utils.class_weight_to_sample_weight
torch_ecg.utils.ensure_lead_fmt
torch_ecg.utils.ensure_siglen
torch_ecg.utils.masks_to_waveforms
torch_ecg.utils.mask_to_intervals
torch_ecg.utils.uniform
torch_ecg.utils.stratified_train_test_split
torch_ecg.utils.cls_to_bin
torch_ecg.utils.generate_weight_mask
Interval operations
torch_ecg.utils.overlaps
torch_ecg.utils.validate_interval
torch_ecg.utils.in_interval
torch_ecg.utils.in_generalized_interval
torch_ecg.utils.intervals_union
torch_ecg.utils.generalized_intervals_union
torch_ecg.utils.intervals_intersection
torch_ecg.utils.generalized_intervals_intersection
torch_ecg.utils.generalized_interval_complement
torch_ecg.utils.get_optimal_covering
torch_ecg.utils.interval_len
torch_ecg.utils.generalized_interval_len
torch_ecg.utils.find_extrema
torch_ecg.utils.is_intersect
torch_ecg.utils.max_disjoint_covering
Metrics computations
torch_ecg.utils.top_n_accuracy
torch_ecg.utils.confusion_matrix
torch_ecg.utils.ovr_confusion_matrix
torch_ecg.utils.metrics_from_confusion_matrix
torch_ecg.utils.compute_wave_delineation_metrics
torch_ecg.utils.QRS_score
Decorators and Mixins
torch_ecg.utils.add_docstring
torch_ecg.utils.remove_parameters_returns_from_docstring
torch_ecg.utils.default_class_repr
ReprMixin
CitationMixin
torch_ecg.utils.get_kwargs
torch_ecg.utils.get_required_args
torch_ecg.utils.add_kwargs
Path operations
torch_ecg.utils.get_record_list_recursive3
String operations
torch_ecg.utils.dict_to_str
torch_ecg.utils.str2bool
torch_ecg.utils.nildent
torch_ecg.utils.get_date_str
Miscellaneous
torch_ecg.utils.init_logger
torch_ecg.utils.list_sum
torch_ecg.utils.dicts_equal
MovingAverage
Timer
torch_ecg.utils.timeout
Examples
Examples
torch-ecg
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